+Marker Data: AFS058_2

Crop bunching_onion
Population DJF2
Linkage Group Chr7b
Marker Type SSR
Map Position 61.3
Annotation
Source Name AB499322
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (ac)8a(ta)6
PCR product (bp) 197
fwd primer AFS058_2-F
fwd primer seq. atggactgaggtgaaaggatgg
rev primer AFS058_2-R
rev primer seq. accttttccattgcgtttgg
fluor. primer AFS058_2-F(FAM)
dye FAM
fluor. Primer seq. FAM-atggactgaggtgaaaggatgg
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499322
annotation
similar marker
product size in J 200
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole 350+600

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s 203 203
D1s-15s-10s-8 193 193
F1s-7s-17s-3s-1
J1s-14s-23s-9 193 197
K1s-5s-2s-2s-4s-5 199 199
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr7b 61.3

DB Program Definition E-Value

EST Name Species Strain