+Marker Data: AFS054_2

Crop bunching_onion
Population DJF2
Linkage Group Chr8
Marker Type SSR
Map Position 79.9
Annotation
Source Name AB499321
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (ta)12t(ac)8
PCR product (bp) 241
fwd primer AFS054-2-F
fwd primer seq. actttttgcctagaacagaagcaga
rev primer AFS054-2-R
rev primer seq. ggtatagaggtggggcgtca
fluor. primer AFS054_2-F(VIC)
dye VIC
fluor. Primer seq. VIC-actttttgcctagaacagaagcaga
PCR condition 94C_2min->(94C_30s->60C_30s,-1C/cyc->72C_30s)x10->(94C_30s->50C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499321
annotation
similar marker
product size in J 220
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7 234 234
Cho1s-1s-2s-2s-8s 296 296
D1s-15s-10s-8 238 238
F1s-7s-17s-3s-1 238 238
J1s-14s-23s-9 232 232
K1s-5s-2s-2s-4s-5 296 296
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr8 79.9

DB Program Definition E-Value

EST Name Species Strain