Crop | bunching_onion |
---|---|
Population | DJF2 |
Linkage Group | Chr8 |
Marker Type | SSR |
Map Position | 79.9 |
Annotation | |
Source Name | AB499321 |
Source Type | genomic |
Source Sequence | |
Developer | NIVTS |
Document | Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223 |
motif | (ta)12t(ac)8 |
---|---|
PCR product (bp) | 241 |
fwd primer | AFS054-2-F |
fwd primer seq. | actttttgcctagaacagaagcaga |
rev primer | AFS054-2-R |
rev primer seq. | ggtatagaggtggggcgtca |
fluor. primer | AFS054_2-F(VIC) |
dye | VIC |
fluor. Primer seq. | VIC-actttttgcctagaacagaagcaga |
PCR condition | 94C_2min->(94C_30s->60C_30s,-1C/cyc->72C_30s)x10->(94C_30s->50C_30s->72C_30s)x35->72C_4min->10C |
polymerase | Toyobo rTaq DNA polymerase |
Genebank No. | AB499321 |
annotation | |
similar marker | |
product size in J | 220 |
product size in Kaizuka-Wase | |
product size in Iki-White | |
product size in Tender Pole |
Line | allele-1 | allele-2 |
---|---|---|
C1s-11s-25s-7 | 234 | 234 |
Cho1s-1s-2s-2s-8s | 296 | 296 |
D1s-15s-10s-8 | 238 | 238 |
F1s-7s-17s-3s-1 | 238 | 238 |
J1s-14s-23s-9 | 232 | 232 |
K1s-5s-2s-2s-4s-5 | 296 | 296 |
Chiang_mai | ||
Kaizuka_Wase |
Population | Linkage Group | Position |
---|---|---|
DJF2 | Chr8 | 79.9 |
DB | Program | Definition | E-Value |
---|
EST Name | Species | Strain |
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