| Crop | bunching_onion |
|---|---|
| Population | DJF2 |
| Linkage Group | Chr6a |
| Marker Type | SSR |
| Map Position | 122.7 |
| Annotation | |
| Source Name | AB499319 |
| Source Type | genomic |
| Source Sequence | |
| Developer | NIVTS |
| Document | Ohara et al. (2005) Euphytica 144:255-263 |
| motif | (at)8 |
|---|---|
| PCR product (bp) | 287 |
| fwd primer | AFS039-F |
| fwd primer seq. | cgggtaataacggatatcataaaca |
| rev primer | AFS039-R |
| rev primer seq. | cagttgttacatgtggtatcagagc |
| fluor. primer | AFS039-F(NED) |
| dye | NED |
| fluor. Primer seq. | NED-cgggtaataacggatatcataaaca |
| PCR condition | 94C_2min->(94C_30s->60C_30s,-1C/cyc->72C_30s)x10->(94C_30s->50C_30s->72C_30s)x35->72C_4min->10C |
| polymerase | Toyobo rTaq DNA polymerase |
| Genebank No. | AB499319 |
| annotation | |
| similar marker | |
| product size in J | 290 |
| product size in Kaizuka-Wase | |
| product size in Iki-White | 290 |
| product size in Tender Pole |
| Line | allele-1 | allele-2 |
|---|---|---|
| C1s-11s-25s-7 | 284 | 284 |
| Cho1s-1s-2s-2s-8s | 290 | 290 |
| D1s-15s-10s-8 | 292 | 292 |
| F1s-7s-17s-3s-1 | 286 | 286 |
| J1s-14s-23s-9 | 288 | 288 |
| K1s-5s-2s-2s-4s-5 | 286 | 286 |
| Chiang_mai | ||
| Kaizuka_Wase |
| Population | Linkage Group | Position |
|---|---|---|
| DJF2 | Chr6a | 122.7 |
| KiCF2 | 6a | 347.8 |
| P1 | J07 | 48.5 |
| P2 | D07 | 50.0 |
| DB | Program | Definition | E-Value |
|---|
| EST Name | Species | Strain |
|---|
