+Marker Data: AFRT01H05

Crop bunching_onion
Population DJF2
Linkage Group Chr8
Marker Type SSR
Map Position 206.3
Annotation
Source Name AB499525
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (tg)6agtgtatatgtatgca(tg)4acagtgtatgtgcaag(tg)10tatgtgcatgtgagtgta(tg)3tatgtaattactcatcccgatcctcg(ct)3
PCR product (bp) 269
fwd primer AFRT01H05-U
fwd primer seq. atatggatggcattagatgcaacg
rev primer AFRT01H05-L
rev primer seq. gtttcttccacctccatccaatgagt
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499525
annotation
similar marker
product size in J 250
product size in Kaizuka-Wase 260
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 420 420
F1s-7s-17s-3s-1
J1s-14s-23s-9 270 270
K1s-5s-2s-2s-4s-5
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr8 206.3

DB Program Definition E-Value

EST Name Species Strain