+Marker Data: AFHT11F10

Crop bunching_onion
Population DJF2
Linkage Group Chr3a
Marker Type SSR
Map Position 110.4
Annotation
Source Name AB499509
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (tg)4catgcatgtttcaa(ta)7(tg)9
PCR product (bp) 214
fwd primer AFHT11F10-U
fwd primer seq. acaaaggaagaagtttttgtgcgt
rev primer AFHT11F10-L
rev primer seq. gtttctttcttcctcttcagggtcc
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499509
annotation
similar marker
product size in J 200
product size in Kaizuka-Wase 210
product size in Iki-White
product size in Tender Pole 150+170

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 310 310
F1s-7s-17s-3s-1
J1s-14s-23s-9 300 300
K1s-5s-2s-2s-4s-5
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr3a 110.4

DB Program Definition E-Value

EST Name Species Strain