+Marker Data: AFHT11E07

Crop bunching_onion
Population DJF2
Linkage Group Chr1b
Marker Type SSR
Map Position 26.0
Annotation
Source Name AB499508
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (ag)8(tg)10(ag)8cgtacttgt(ta)3ttttcattttcaaaac(ta)3ttattatatt(ta)4
PCR product (bp) 221
fwd primer AFHT11E07-U
fwd primer seq. aggtgagcttaggttgcgttgttt
rev primer AFHT11E07-L
rev primer seq. gtttcaagtagtacccgttggtgcagtg
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499508
annotation
similar marker
product size in J 230
product size in Kaizuka-Wase 180+190
product size in Iki-White 200
product size in Tender Pole 200

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 200 200
F1s-7s-17s-3s-1
J1s-14s-23s-9 200 220
K1s-5s-2s-2s-4s-5
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr1b 26.0

DB Program Definition E-Value

EST Name Species Strain