+Marker Data: AFC03G02

Crop bunching_onion
Population DJF2
Linkage Group Chr3b
Marker Type SSR
Map Position 116.9
Annotation
Source Name AB499502
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2007) Euphytica 157:83-94

motif (tct)9
PCR product (bp) 164
fwd primer AFC03G02-U
fwd primer seq. acatctccctcttgtctgatgtcg
rev primer AFC03G02-L
rev primer seq. gtttccgatgaagttcgagtagaaggg
fluor. primer AFC03G02-F(NED)
dye NED
fluor. Primer seq. NED-acatctccctcttgtctgatgtcg
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499502
annotation
similar marker
product size in J 160
product size in Kaizuka-Wase 160
product size in Iki-White
product size in Tender Pole 150

Line allele-1 allele-2
C1s-11s-25s-7 164 164
Cho1s-1s-2s-2s-8s 172 172
D1s-15s-10s-8 164 164
F1s-7s-17s-3s-1 166 166
J1s-14s-23s-9 168 168
K1s-5s-2s-2s-4s-5 164 164
Chiang_mai 256 256
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr3b 116.9
FA 3b 17.0

DB Program Definition E-Value

EST Name Species Strain