+Marker Data: AFB09D06

Crop bunching_onion
Population DJF2
Linkage Group Chr2a
Marker Type SSR
Map Position 38.8
Annotation
Source Name AB499487
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (ta)3cataaaacataggtgttcatc(ct)3ttctttcttttttga(ta)3cataaatac(tc)20
PCR product (bp) 295
fwd primer AFB09D06-U
fwd primer seq. aaggacactcatgtggcttgtctt
rev primer AFB09D06-L
rev primer seq. gtttcgagagaatttgtgtggaggatt
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499487
annotation
similar marker
product size in J 300
product size in Kaizuka-Wase 300
product size in Iki-White 280
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7 285 285
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 280 280
F1s-7s-17s-3s-1 280 280
J1s-14s-23s-9 300 300
K1s-5s-2s-2s-4s-5 280 280
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr2a 38.8

DB Program Definition E-Value

EST Name Species Strain