+Marker Data: AFB05H09

Crop bunching_onion
Population DJF2
Linkage Group Chr3a
Marker Type SSR
Map Position 121.8
Annotation
Source Name AB499483
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2007) Euphytica 157:83-94

motif (ag)17(cg)5
PCR product (bp) 274
fwd primer AFB05H09-U
fwd primer seq. acgagcgtatcccctaagaagaat
rev primer AFB05H09-L
rev primer seq. gtttggtccctagatttcactgcaca
fluor. primer AFB05H09-F(VIC)
dye VIC
fluor. Primer seq. VIC-acgagcgtatcccctaagaagaat
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499483
annotation
similar marker
product size in J 270
product size in Kaizuka-Wase 270
product size in Iki-White 270
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7 268 268
Cho1s-1s-2s-2s-8s 268 268
D1s-15s-10s-8 268 268
F1s-7s-17s-3s-1 270 270
J1s-14s-23s-9 272 272
K1s-5s-2s-2s-4s-5 270 270
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr3a 121.8
KiCF2 3a 385.4
SaT03 3a 81.3

DB Program Definition E-Value

EST Name Species Strain