+Marker Data: AFB04C03

Crop bunching_onion
Population DJF2
Linkage Group Chr2a
Marker Type SSR
Map Position 169.1
Annotation
Source Name AB499478
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (caa)4aacaaaataaccaaaaaac(ag)21(tg)8
PCR product (bp) 237
fwd primer AFB04C03-U
fwd primer seq. ataaaacccttcatcgtatgccca
rev primer AFB04C03-L
rev primer seq. gtttgagtgctcctggtgaatctccttc
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499478
annotation
similar marker
product size in J 220
product size in Kaizuka-Wase 220
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 230 230
F1s-7s-17s-3s-1
J1s-14s-23s-9 260 260
K1s-5s-2s-2s-4s-5
Chiang_mai - -
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr2a 169.1

DB Program Definition E-Value

EST Name Species Strain