+Marker Data: AFAT05E04

Crop bunching_onion
Population DJF2
Linkage Group Chr8
Marker Type SSR
Map Position 202.1
Annotation
Source Name AB499455
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (ta)3tg(ta)3tctctgtgtctgtg(tc)3(tg)8ggggggtgtg(gt)3(tg)5
PCR product (bp) 199
fwd primer AFAT05E04-U
fwd primer seq. agttatttgaggtgaagcagcaaga
rev primer AFAT05E04-L
rev primer seq. gtttccatttttgatgtggagcaaaacc
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499455
annotation
similar marker
product size in J 200
product size in Kaizuka-Wase 190
product size in Iki-White 190
product size in Tender Pole 1000

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 187 187
F1s-7s-17s-3s-1 190 190
J1s-14s-23s-9 205 205
K1s-5s-2s-2s-4s-5
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr8 202.1

DB Program Definition E-Value

EST Name Species Strain