+Marker Data: AFAT04D12

Crop bunching_onion
Population DJF2
Linkage Group Chr3a
Marker Type SSR
Map Position 71.6
Annotation
Source Name AB499450
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (ac)10a(ta)7tccacgtgag(ta)3tgaatattagttttaatac(at)3
PCR product (bp) 259
fwd primer AFAT04D12-U
fwd primer seq. agcgtgtacatacacacattcatacata
rev primer AFAT04D12-L
rev primer seq. gtttaatattttccattaattatacatcacaatcg
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499450
annotation
similar marker
product size in J 260
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7 270 270
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 280 280
F1s-7s-17s-3s-1 270 270
J1s-14s-23s-9 270 270
K1s-5s-2s-2s-4s-5 300 300
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr3a 71.6

DB Program Definition E-Value

EST Name Species Strain