+Marker Data: AFA23D09

Crop bunching_onion
Population DJF2
Linkage Group Chr3b
Marker Type SSR
Map Position 84.0
Annotation
Source Name AB499428
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (ac)4aagc(ac)8a(ta)7
PCR product (bp) 182
fwd primer AFA23D09-U
fwd primer seq. atggcattggctttgataacacac
rev primer AFA23D09-L
rev primer seq. gtttggatcgatagtgtacgagacagcg
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499428
annotation
similar marker
product size in J 200
product size in Kaizuka-Wase 200
product size in Iki-White 200
product size in Tender Pole 200

Line allele-1 allele-2
C1s-11s-25s-7 160 160
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 164 164
F1s-7s-17s-3s-1 164 164
J1s-14s-23s-9 162 162
K1s-5s-2s-2s-4s-5 190 190
Chiang_mai - -
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr3b 84.0

DB Program Definition E-Value

EST Name Species Strain