+Marker Data: AFA15G07

Crop bunching_onion
Population DJF2
Linkage Group Chr4a
Marker Type SSR
Map Position 33.2
Annotation
Source Name AB499419
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (ac)7aaaa(ac)8
PCR product (bp) 216
fwd primer AFA15G07-U
fwd primer seq. agagcgagaacaatagtggaggga
rev primer AFA15G07-L
rev primer seq. gtttaacgaatacctaaggaagggtaacg
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499419
annotation
similar marker
product size in J 300
product size in Kaizuka-Wase 300
product size in Iki-White 260
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7 213 221
Cho1s-1s-2s-2s-8s 213 213
D1s-15s-10s-8 213 213
F1s-7s-17s-3s-1 213 213
J1s-14s-23s-9 221 221
K1s-5s-2s-2s-4s-5 221 221
Chiang_mai 195 195
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr4a 33.2
SaT03 4a 44.2

DB Program Definition E-Value

EST Name Species Strain