+Marker Data: AFA15E08

Crop bunching_onion
Population DJF2
Linkage Group Chr7b
Marker Type SSR
Map Position 109.3
Annotation
Source Name AB499418
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (tg)8tattg(ta)3
PCR product (bp) 243
fwd primer AFA15E08-U
fwd primer seq. agagaagtgtgtgtaaggcaaggc
rev primer AFA15E08-L
rev primer seq. gtttgccccaaagtcatactgctggtag
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499418
annotation
similar marker
product size in J 230
product size in Kaizuka-Wase 230+240
product size in Iki-White 200
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7 241 245
Cho1s-1s-2s-2s-8s 245 245
D1s-15s-10s-8 277 277
F1s-7s-17s-3s-1 241 241
J1s-14s-23s-9 279 279
K1s-5s-2s-2s-4s-5 241 241
Chiang_mai 294 294
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr7b 109.3
KiCF2 7b 152.2
SaT03 7b 32.0

DB Program Definition E-Value

EST Name Species Strain