+Marker Data: AFA14G03

Crop bunching_onion
Population DJF2
Linkage Group Chr5
Marker Type SSR
Map Position 49.5
Annotation
Source Name AB499415
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2007) Euphytica 157:83-94
motif (tg)12
PCR product (bp) 211
fwd primer AFA14G03-U
fwd primer seq. atccatgaatgggaggtcttctgt
rev primer AFA14G03-L
rev primer seq. gtttctttttccaaaaggattcacacgc
fluor. primer AFA14G03-F(VIC)
dye VIC
fluor. Primer seq. VIC-atccatgaatgggaggtcttctgt
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499415
annotation
similar marker
product size in J 220
product size in Kaizuka-Wase 220
product size in Iki-White 220
product size in Tender Pole 220
Line allele-1 allele-2
C1s-11s-25s-7 216 216
Cho1s-1s-2s-2s-8s 216 216
D1s-15s-10s-8 216 216
F1s-7s-17s-3s-1 214 216
J1s-14s-23s-9 222 222
K1s-5s-2s-2s-4s-5 216 216
Chiang_mai 216 218
Kaizuka_Wase
Population Linkage Group Position
DJF2 Chr5 49.5
FA 5a-2 18.8
SaT03 5a 49.0
DB Program Definition E-Value
EST Name Species Strain