+Marker Data: AFA09A06

Crop bunching_onion
Population DJF2
Linkage Group Chr1a
Marker Type SSR
Map Position 66.6
Annotation
Source Name AB499395
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (ta)3gta(at)3gtctaat(ac)11
PCR product (bp) 277
fwd primer AFA09A06-U
fwd primer seq. atcatatgttggtcatatcgtccatgt
rev primer AFA09A06-L
rev primer seq. gtttatttgggcgatgcgatacct
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499395
annotation
similar marker
product size in J 260
product size in Kaizuka-Wase
product size in Iki-White 250
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 280 280
F1s-7s-17s-3s-1
J1s-14s-23s-9 272 272
K1s-5s-2s-2s-4s-5
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr1a 66.6

DB Program Definition E-Value

EST Name Species Strain