+Marker Data: AFA07G06

Crop bunching_onion
Population DJF2
Linkage Group Chr8
Marker Type SSR
Map Position 58.9
Annotation
Source Name AB499387
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2007) Euphytica 157:83-94

motif (tg)5tc(ta)5(tg)14
PCR product (bp) 188
fwd primer AFA07G06-U
fwd primer seq. agaaccgttcccatctaccttctg
rev primer AFA07G06-L
rev primer seq. gtttgagatcgtgatacaacaaggcg
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499387
annotation
similar marker
product size in J
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 160 180
F1s-7s-17s-3s-1
J1s-14s-23s-9 160 200
K1s-5s-2s-2s-4s-5
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr8 58.9

DB Program Definition E-Value

EST Name Species Strain