+Marker Data: AFA07F06

Crop bunching_onion
Population DJF2
Linkage Group Chr3a
Marker Type SSR
Map Position 68.9
Annotation
Source Name AB499386
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (ta)7(tg)14
PCR product (bp) 296
fwd primer AFA07F06-U
fwd primer seq. atagcgaagaaggaagaaagggtg
rev primer AFA07F06-L
rev primer seq. gtttggtttagctcaacgaaattggct
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499386
annotation
similar marker
product size in J 250+260
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 293 293
F1s-7s-17s-3s-1
J1s-14s-23s-9 299 299
K1s-5s-2s-2s-4s-5
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr3a 68.9

DB Program Definition E-Value

EST Name Species Strain