+Marker Data: AFA07D01

Crop bunching_onion
Population DJF2
Linkage Group Chr5
Marker Type SSR
Map Position 62.7
Annotation
Source Name AB499384
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (ta)3(tg)16ttcctttgc(at)3
PCR product (bp) 285
fwd primer AFA07D01-U
fwd primer seq. actcattttgtgtgtactgtaatttgtcca
rev primer AFA07D01-L
rev primer seq. gtttaatttgattttgggtcgttatcaa
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499384
annotation
similar marker
product size in J 270
product size in Kaizuka-Wase 280
product size in Iki-White 300
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 280 280
F1s-7s-17s-3s-1
J1s-14s-23s-9 290 290
K1s-5s-2s-2s-4s-5
Chiang_mai 320 320
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr5 62.7

DB Program Definition E-Value

EST Name Species Strain