+Marker Data: AFA05G04

Crop bunching_onion
Population DJF2
Linkage Group Chr1c
Marker Type SSR
Map Position 31.7
Annotation
Source Name AB499373
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (tg)11(ta)5(tg)3
PCR product (bp) 201
fwd primer AFA05G04-U
fwd primer seq. agtttgaattttggcatctatttgcat
rev primer AFA05G04-L
rev primer seq. gtttagtatgcttggttaggtgagcaaagg
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499373
annotation
similar marker
product size in J
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7 190 190
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 180 180
F1s-7s-17s-3s-1
J1s-14s-23s-9 210 210
K1s-5s-2s-2s-4s-5
Chiang_mai - -
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr1c 31.7

DB Program Definition E-Value

EST Name Species Strain