+Marker Data: AFA05G02

Crop bunching_onion
Population DJF2
Linkage Group Chr1a
Marker Type SSR
Map Position 56.2
Annotation
Source Name AB499372
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (tg)4(ta)7(tg)15
PCR product (bp) 159
fwd primer AFA05G02-U
fwd primer seq. atccagcatgaagccacttaaca
rev primer AFA05G02-L
rev primer seq. gtttgacaaaactggttatcaaacaaagg
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499372
annotation
similar marker
product size in J 150
product size in Kaizuka-Wase 150
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 150 150
F1s-7s-17s-3s-1
J1s-14s-23s-9 160 160
K1s-5s-2s-2s-4s-5
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr1a 56.2

DB Program Definition E-Value

EST Name Species Strain