+Marker Data: AFA04G08

Crop bunching_onion
Population DJF2
Linkage Group Chr3b
Marker Type SSR
Map Position 98.7
Annotation
Source Name AB499368
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (tg)11(ta)3
PCR product (bp) 211
fwd primer AFA04G08-U
fwd primer seq. atgtgggtcgtatcaaagtggcat
rev primer AFA04G08-L
rev primer seq. gtttcatatcactaacaaatacgcgcac
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499368
annotation
similar marker
product size in J 200
product size in Kaizuka-Wase 210
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 200 200
F1s-7s-17s-3s-1
J1s-14s-23s-9 205 205
K1s-5s-2s-2s-4s-5
Chiang_mai - -
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr3b 98.7

DB Program Definition E-Value

EST Name Species Strain