+Marker Data: AFA03H03

Crop bunching_onion
Population DJF2
Linkage Group Chr6a
Marker Type SSR
Map Position 89.3
Annotation
Source Name AB499366
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (tca)3cacggcacggtagtgagaaaagaa(ta)6(tg)16t(tct)3
PCR product (bp) 215
fwd primer AFA03H03-U
fwd primer seq. attccattcaaacacgtttccctc
rev primer AFA03H03-L
rev primer seq. gtttcagttgacgatgagccttggtatg
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499366
annotation
similar marker
product size in J 220
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 215 215
F1s-7s-17s-3s-1
J1s-14s-23s-9 219 219
K1s-5s-2s-2s-4s-5
Chiang_mai 200 200
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr6a 89.3

DB Program Definition E-Value

EST Name Species Strain