+Marker Data: AFA02H08

Crop bunching_onion
Population DJF2
Linkage Group Chr6a
Marker Type SSR
Map Position 82.3
Annotation
Source Name AB499357
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2007) Euphytica 157:83-94

motif (ta)3cat(ac)4aa(ac)12atacattgagccacgcttact(ca)3
PCR product (bp) 183
fwd primer AFA02H08-U
fwd primer seq. agatcttggatagttattaaagtagttccagtaga
rev primer AFA02H08-L
rev primer seq. gtttgggctgaaatattatgtgggtttg
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499357
annotation
similar marker
product size in J 200
product size in Kaizuka-Wase 200
product size in Iki-White 200
product size in Tender Pole 200

Line allele-1 allele-2
C1s-11s-25s-7 187 195
Cho1s-1s-2s-2s-8s 187 187
D1s-15s-10s-8 185 185
F1s-7s-17s-3s-1 185 185
J1s-14s-23s-9 183 189
K1s-5s-2s-2s-4s-5 181 181
Chiang_mai - -
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr6a 82.3
KiCF2 6a 180.9

DB Program Definition E-Value

EST Name Species Strain