+Marker Data: AFA01A04

Crop bunching_onion
Population DJF2
Linkage Group Chr2a
Marker Type SSR
Map Position 216.1
Annotation
Source Name AB499340
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (ta)5(tg)14cgcgc(gt)3atgtcactttgttcata(at)3
PCR product (bp) 270
fwd primer AFA01A04-U
fwd primer seq. actatatttggtgacattcctgaag
rev primer AFA01A04-L
rev primer seq. gtttcgaccacgcataacatatgtccac
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499340
annotation
similar marker
product size in J 270
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 266 266
F1s-7s-17s-3s-1
J1s-14s-23s-9 270 270
K1s-5s-2s-2s-4s-5
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr2a 216.1

DB Program Definition E-Value

EST Name Species Strain