+Marker Data: ACE087

Crop bunching_onion
Population DJF2
Linkage Group Chr4a
Marker Type SSR
Map Position 15.6
Annotation
Source Name CF449129
Source Type onion_EST
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (ta)31
PCR product (bp) 279
fwd primer ACE087-F
fwd primer seq. aggccacatctgattatgcttttcc
rev primer ACE087-R
rev primer seq. tcccggaatcttgaatagaagaca
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->60C_30s,-1C/cyc->72C_30s)x10->(94C_30s->50C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. CF449129
annotation similar to GP|4115746|dbj|BAA36492.1||AB021736 bZIP protein {Oryza sativa (indica cultivar-group)}, partial (23%)
similar marker ACM307
product size in J 250
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 250 250
F1s-7s-17s-3s-1
J1s-14s-23s-9 258 258
K1s-5s-2s-2s-4s-5
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr4a 15.6

DB Program Definition E-Value

EST Name Species Strain