+Marker Data: est_sep05j01

Crop eggplant
Population LWAE2012
Linkage Group E_01
Marker Type SNP
Map Position 26.533
Annotation
Source Name SEP05J01
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class EST-misc
STS_primer_fwd CTCCGAATATTCAATGGGCTTGAC
STS_primer_rev TACCAATTGCCACCAAGGTTCTTC
amplicon_seq TTAGGCAAAAAGGAGATAAACATGTACCTAAGAGTAAGCAAGAGAAAACATATGCAGGACTCTTTCAGATAATAAAGATGTGATTCCCCAAAATACTCAAAAGGTATTTTGTATGTAAATGCTCACGGAAAAACACTTCATCATCATCACCAACAACAACAAGAAGCAGCACTGTCACCACCACAGCCCAAGGATGTGGCCTAGAGGAGTGCTGGTCCGTAAGTGGATGAAAACTATGGTTTTAATGCCAATAGTAGCAAAAATTACTAGGTGATTTCTTCCCATTTTGCTGTATGGAGACTGTCCTAGTGCTAGTATAACTGCAAATTCTTCCTTACTAAACCAAGAATAAGAGCTGCTAATTGTTTTGCATTCATAAAGCACAGAGAAGGCAGTATCAAAAAGTAGACCCTATTTACCACCTAGAAGTTCTCATCAATAGGAATTTTAAAATAAGGCTTGTTGGGACATATCCAGTAATATTGATTTACACACTATCATGTGCTTTGTGTTGTTAGTCGTCCTTTATGTTTTCTTTTCTTTTCCTTCCCATTTTTTTCATATCTAGTTTATTCTGCTTATGAGTTTTTGAGACGAGGGTTCCAAGGAAACAACCTTTCTACCTTTGAGGTAGTGATAAGGTTACATTCTACCCTCCCCAGACCCCACTTGTGGGATTCCACTGGGTATGTTGTTGTTGTTGTTCAACAAGTTTGAATCTTTTTTGCCCAAAATAAATTCAGACATCGCCAAATG
SNP_position 109
allele_1 T
allele_2 G
ASP_primer_S GCGGGCTGTTTTTCCGTGAGCATTTACATACAA
ASP_primer_L GCGGGCAGGGCGGCTGTTTTTCCGTGAGCATTTACATACAC
Common_primer TGTGATTCCCCAAAATACTCAAAAGGT
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 T T
LS1934 G G
WCGR112-8 T T

Population Linkage Group Position
LW2010 E_01 28.1
LWA2010 LWA_01 24.515
LWAE2012 E_01 26.533
LWF2_2022 E_01 168.3

DB Program Definition E-Value

EST Name Species Strain